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Pipeline: Automatic Vascular Territory Processing
Type: ASL
Description: analyzes MRI perfusion images using vascular territory ROIs
Source: Northwestern University, Carroll Lab
Details:
First, perfusion values are calculated from the DSC images if they haven't already been reconstructed online. Perfusion and anatomic images are read in as dicoms, transformed to NIFTI format (via SPM), and go through a series of corgistration & normalization steps (again via SPM). Finally an array of perfusion values arranged by region is returned.